IL_4V4I_054

3D structure

PDB id

4V4I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

GCAAU*AGC

Length

8 nucleotides

Bulged bases

4V4I|1|w|G|1332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4I_054 not in the Motif Atlas

Homologous match to IL_7RQB_051

Geometric discrepancy: 0.2806

The information below is about IL_7RQB_051

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.6

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

14

Unit IDs

4V4I|1|w|G|1319
4V4I|1|w|C|1320
4V4I|1|w|A|1321
4V4I|1|w|A|1322
4V4I|1|w|U|1323
*
4V4I|1|w|A|1331
4V4I|1|w|G|1332
4V4I|1|w|C|1333

Current chains

Chain w

23S LARGE SUBUNIT RIBOSOMAL RNA

Nearby chains

Chain Q

50S ribosomal protein L22