IL_4V4I_101
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 4V4I|1|w|G|2780, 4V4I|1|w|A|2781
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4I_101 not in the Motif Atlas
- Homologous match to IL_7A0S_093
- Geometric discrepancy: 0.3091
- The information below is about IL_7A0S_093
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
4V4I|1|w|U|2636
4V4I|1|w|U|2637
4V4I|1|w|G|2638
4V4I|1|w|A|2639
4V4I|1|w|G|2640
*
4V4I|1|w|C|2774
4V4I|1|w|A|2775
4V4I|1|w|A|2776
4V4I|1|w|G|2777
4V4I|1|w|A|2778
4V4I|1|w|U|2779
4V4I|1|w|G|2780
4V4I|1|w|A|2781
4V4I|1|w|G|2782
Current chains
- Chain w
- 23S LARGE SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain H
- 50S ribosomal protein L13
Coloring options: