IL_4V4I_105
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- CU*AUAG*G
- Length
- 7 nucleotides
- Bulged bases
- 4V4I|1|w|U|2712, 4V4I|1|w|A|2713
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4I_105 not in the Motif Atlas
- Geometric match to IL_5TBW_136
- Geometric discrepancy: 0.3805
- The information below is about IL_5TBW_136
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
4V4I|1|w|C|2695
4V4I|1|w|U|2696
*
4V4I|1|w|A|2711
4V4I|1|w|U|2712
4V4I|1|w|A|2713
4V4I|1|w|G|2714
*
4V4I|1|w|G|2714
Current chains
- Chain w
- 23S LARGE SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain L
- 50S ribosomal protein L17
- Chain N
- 50S ribosomal protein L19
Coloring options: