IL_4V4I_151
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases (A, C, G, U)
- 934C
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4I_151 not in the Motif Atlas
- Homologous match to IL_4LFB_037
- Geometric discrepancy: 0.3212
- The information below is about IL_4LFB_037
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.1
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
4V4I|1|y|G|933
4V4I|1|y|C|934
4V4I|1|y|A|935
*
4V4I|1|y|U|1380
4V4I|1|y|U|1381
4V4I|1|y|C|1382
4V4I|1|y|C|1383
4V4I|1|y|C|1384
Current chains
- Chain y
- 16S SMALL SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain 0
- Transfer RNA; tRNA
- Chain h
- 30S ribosomal protein S7
- Chain j
- 30S ribosomal protein S9
- Chain z
- Transfer RNA; tRNA
Coloring options: