IL_4V4I_170
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4I_170 not in the Motif Atlas
- Homologous match to IL_6CZR_169
- Geometric discrepancy: 0.3387
- The information below is about IL_6CZR_169
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.14
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 36
Unit IDs
4V4I|1|y|G|1416
4V4I|1|y|G|1417
4V4I|1|y|A|1418
4V4I|1|y|G|1419
*
4V4I|1|y|U|1481
4V4I|1|y|G|1482
4V4I|1|y|A|1483
4V4I|1|y|C|1484
Current chains
- Chain y
- 16S SMALL SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain I
- 50S ribosomal protein L14
- Chain m
- 30S ribosomal protein S12
- Chain w
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: