IL_4V4P_133
3D structure
- PDB id
- 4V4P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of 70S ribosome with thrS operator and tRNAs.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5.5 Å
Loop
- Sequence
- GUCAC*GAAGUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4P_133 not in the Motif Atlas
- Homologous match to IL_5J7L_060
- Geometric discrepancy: 0.3623
- The information below is about IL_5J7L_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4P|1|BA|G|1405
4V4P|1|BA|U|1406
4V4P|1|BA|C|1407
4V4P|1|BA|A|1408
4V4P|1|BA|C|1409
*
4V4P|1|BA|G|1491
4V4P|1|BA|A|1492
4V4P|1|BA|A|1493
4V4P|1|BA|G|1494
4V4P|1|BA|U|1495
4V4P|1|BA|C|1496
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain B1
- thrS mRNA operator
- Chain BB
- Transfer RNA; tRNA
- Chain BC
- Transfer RNA; tRNA
- Chain BO
- 30S ribosomal protein S12
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