IL_4V4P_146
3D structure
- PDB id
- 4V4P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of 70S ribosome with thrS operator and tRNAs.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5.5 Å
Loop
- Sequence
- CUAAGG*CCGAAG
- Length
- 12 nucleotides
- Bulged bases
- 4V4P|1|AA|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4P_146 not in the Motif Atlas
- Geometric match to IL_9AXU_113
- Geometric discrepancy: 0.2787
- The information below is about IL_9AXU_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74322.2
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V4P|1|AA|C|998
4V4P|1|AA|U|999
4V4P|1|AA|A|1000
4V4P|1|AA|A|1001
4V4P|1|AA|G|1002
4V4P|1|AA|G|1003
*
4V4P|1|AA|C|1152
4V4P|1|AA|C|1153
4V4P|1|AA|G|1154
4V4P|1|AA|A|1155
4V4P|1|AA|A|1156
4V4P|1|AA|G|1157
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain A1
- 50S ribosomal protein L20
- Chain A2
- 50S ribosomal protein L21
- Chain AB
- 5S ribosomal RNA; 5S rRNA
- Chain AX
- 50S ribosomal protein L30
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