IL_4V4S_147
3D structure
- PDB id
- 4V4S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the whole ribosomal complex.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6.76 Å
Loop
- Sequence
- UGA*UACA
- Length
- 7 nucleotides
- Bulged bases
- 4V4S|1|AA|A|1394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4S_147 not in the Motif Atlas
- Geometric match to IL_4WF9_018
- Geometric discrepancy: 0.2875
- The information below is about IL_4WF9_018
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4V4S|1|AA|U|921
4V4S|1|AA|G|922
4V4S|1|AA|A|923
*
4V4S|1|AA|U|1393
4V4S|1|AA|A|1394
4V4S|1|AA|C|1395
4V4S|1|AA|A|1396
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AE
- 30S ribosomal protein S5
- Chain AX
- 5'-D(*AP*UP*GP*UP*UP*CP*UP*AP*GP*AP*UP*AP*CP*AP*AP*UP*AP*AP*U)-3'
Coloring options: