IL_4V4X_059
3D structure
- PDB id
- 4V4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5 Å
Loop
- Sequence
- GGGAG*CGUGGAUC
- Length
- 13 nucleotides
- Bulged bases
- 4V4X|1|BA|G|101
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4X_059 not in the Motif Atlas
- Homologous match to IL_7A0S_004
- Geometric discrepancy: 0.4621
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
4V4X|1|BA|G|81
4V4X|1|BA|G|82
4V4X|1|BA|G|83
4V4X|1|BA|A|84
4V4X|1|BA|G|85
*
4V4X|1|BA|C|97
4V4X|1|BA|G|98
4V4X|1|BA|U|99
4V4X|1|BA|G|101
4V4X|1|BA|G|102
4V4X|1|BA|A|103
4V4X|1|BA|U|104
4V4X|1|BA|C|105
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 50S ribosomal protein L29
- Chain BX
- 50S ribosomal protein L24
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