IL_4V5A_100
3D structure
- PDB id
- 4V5A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAUGAAGG*CUGGAG
- Length
- 15 nucleotides
- Bulged bases
- 4V5A|1|BA|U|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5A_100 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.3849
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
4V5A|1|BA|C|1208
4V5A|1|BA|G|1209
4V5A|1|BA|A|1210
4V5A|1|BA|U|1211
4V5A|1|BA|G|1212
4V5A|1|BA|A|1213
4V5A|1|BA|A|1214
4V5A|1|BA|G|1215
4V5A|1|BA|G|1216
*
4V5A|1|BA|C|1233
4V5A|1|BA|U|1234
4V5A|1|BA|G|1235
4V5A|1|BA|G|1236
4V5A|1|BA|A|1237
4V5A|1|BA|G|1238
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BU
- 50S RIBOSOMAL PROTEIN L20
Coloring options: