IL_4V5A_203
3D structure
- PDB id
- 4V5A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGCAU*AUGG
- Length
- 10 nucleotides
- Bulged bases
- 4V5A|1|CA|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5A_203 not in the Motif Atlas
- Geometric match to IL_4V88_473
- Geometric discrepancy: 0.2979
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
4V5A|1|CA|C|1051
4V5A|1|CA|U|1052
4V5A|1|CA|G|1053
4V5A|1|CA|C|1054
4V5A|1|CA|A|1055
4V5A|1|CA|U|1056
*
4V5A|1|CA|A|1204
4V5A|1|CA|U|1205
4V5A|1|CA|G|1206
4V5A|1|CA|G|1207
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CC
- 30S RIBOSOMAL PROTEIN S3
- Chain CJ
- 30S RIBOSOMAL PROTEIN S10
- Chain CN
- 30S RIBOSOMAL PROTEIN S14
- Chain CX
- MRNA
Coloring options: