IL_4V5B_036
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 4V5B|1|AB|U|1033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5B_036 not in the Motif Atlas
- Homologous match to IL_4WF9_041
- Geometric discrepancy: 0.2251
- The information below is about IL_4WF9_041
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
4V5B|1|AB|G|1031
4V5B|1|AB|A|1032
4V5B|1|AB|U|1033
4V5B|1|AB|G|1034
*
4V5B|1|AB|C|1121
4V5B|1|AB|G|1122
4V5B|1|AB|C|1123
Current chains
- Chain AB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain A4
- 50S RIBOSOMAL PROTEIN L36
- Chain AM
- 50S RIBOSOMAL PROTEIN L16
Coloring options: