IL_4V5B_142
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- UGGC*GUCAUCA
- Length
- 11 nucleotides
- Bulged bases
- 4V5B|1|BA|C|1200, 4V5B|1|BA|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5B_142 not in the Motif Atlas
- Geometric match to IL_8C3A_457
- Geometric discrepancy: 0.3882
- The information below is about IL_8C3A_457
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55620.1
- Basepair signature
- cWW-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
4V5B|1|BA|U|1056
4V5B|1|BA|G|1057
4V5B|1|BA|G|1058
4V5B|1|BA|C|1059
*
4V5B|1|BA|G|1198
4V5B|1|BA|U|1199
4V5B|1|BA|C|1200
4V5B|1|BA|A|1201
4V5B|1|BA|U|1202
4V5B|1|BA|C|1203
4V5B|1|BA|A|1204
Current chains
- Chain BA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain BC
- 30S RIBOSOMAL PROTEIN S3
- Chain BJ
- 30S RIBOSOMAL PROTEIN S10
- Chain BN
- 30S RIBOSOMAL PROTEIN S14
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