IL_4V5B_271
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- CAG*CAGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5B_271 not in the Motif Atlas
- Homologous match to IL_5J7L_021
- Geometric discrepancy: 0.2629
- The information below is about IL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33323.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4V5B|1|DA|C|440
4V5B|1|DA|A|441
4V5B|1|DA|G|442
*
4V5B|1|DA|C|492
4V5B|1|DA|A|493
4V5B|1|DA|G|494
4V5B|1|DA|A|495
4V5B|1|DA|A|496
4V5B|1|DA|G|497
Current chains
- Chain DA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain AH
- 50S RIBOSOMAL PROTEIN L9
- Chain DD
- 30S RIBOSOMAL PROTEIN S4
Coloring options: