IL_4V5B_277
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 4V5B|1|DA|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5B_277 not in the Motif Atlas
- Homologous match to IL_6CZR_134
- Geometric discrepancy: 0.2031
- The information below is about IL_6CZR_134
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.5
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
4V5B|1|DA|C|569
4V5B|1|DA|G|570
4V5B|1|DA|U|571
4V5B|1|DA|A|572
4V5B|1|DA|A|573
4V5B|1|DA|A|574
4V5B|1|DA|G|575
*
4V5B|1|DA|C|880
4V5B|1|DA|G|881
Current chains
- Chain DA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain DH
- 30S RIBOSOMAL PROTEIN S8
- Chain DL
- 30S RIBOSOMAL PROTEIN S12
- Chain DQ
- 30S RIBOSOMAL PROTEIN S17
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