IL_4V5G_228
3D structure
- PDB id
- 4V5G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CUAG*CGAAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5G_228 not in the Motif Atlas
- Homologous match to IL_7A0S_008
- Geometric discrepancy: 0.5385
- The information below is about IL_7A0S_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15067.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
4V5G|1|DA|C|292
4V5G|1|DA|U|293
4V5G|1|DA|A|294
4V5G|1|DA|G|295
*
4V5G|1|DA|C|343
4V5G|1|DA|G|344
4V5G|1|DA|A|345
4V5G|1|DA|A|346
4V5G|1|DA|A|347
4V5G|1|DA|G|348
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain DY
- 50S RIBOSOMAL PROTEIN L24
Coloring options: