IL_4V5H_018

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

ACAAU*AU

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_018 not in the Motif Atlas

Geometric match to IL_4LFB_015

Geometric discrepancy: 0.1961

The information below is about IL_4LFB_015

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_26900.1

Basepair signature

cWW-cSH-cWS-tWH-cWW

Number of instances in this motif group

5

Unit IDs

4V5H|1|AA|A|371
4V5H|1|AA|C|372
4V5H|1|AA|A|373
4V5H|1|AA|A|374
4V5H|1|AA|U|375
*
4V5H|1|AA|A|389
4V5H|1|AA|U|390

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AP

30S RIBOSOMAL PROTEIN S16