IL_4V5H_089
3D structure
- PDB id
- 4V5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- UUAAC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5H_089 not in the Motif Atlas
- Homologous match to IL_5J7L_258
- Geometric discrepancy: 0.1163
- The information below is about IL_5J7L_258
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V5H|1|BB|U|606
4V5H|1|BB|U|607
4V5H|1|BB|A|608
4V5H|1|BB|A|609
4V5H|1|BB|C|610
*
4V5H|1|BB|G|618
4V5H|1|BB|G|619
4V5H|1|BB|G|620
4V5H|1|BB|A|621
4V5H|1|BB|G|622
Current chains
- Chain BB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BE
- 50S RIBOSOMAL PROTEIN L4
- Chain BL
- 50S RIBOSOMAL PROTEIN L15
Coloring options: