IL_4V5H_094

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_094 not in the Motif Atlas

Homologous match to IL_5J7L_263

Geometric discrepancy: 0.1309

The information below is about IL_5J7L_263

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

4V5H|1|BB|U|703
4V5H|1|BB|G|704
4V5H|1|BB|A|705
4V5H|1|BB|A|706
4V5H|1|BB|G|707
*
4V5H|1|BB|U|724
4V5H|1|BB|G|725
4V5H|1|BB|G|726
4V5H|1|BB|A|727
4V5H|1|BB|G|728

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BC

50S RIBOSOMAL PROTEIN L2