IL_4V5H_115

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

4V5H|1|BB|U|1061, 4V5H|1|BB|U|1078

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_115 not in the Motif Atlas

Homologous match to IL_5J7L_285

Geometric discrepancy: 0.5825

The information below is about IL_5J7L_285

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

4V5H|1|BB|G|1059
4V5H|1|BB|U|1060
4V5H|1|BB|U|1061
4V5H|1|BB|G|1062
*
4V5H|1|BB|C|1076
4V5H|1|BB|A|1077
4V5H|1|BB|U|1078
4V5H|1|BB|C|1079

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BI

50S RIBOSOMAL PROTEIN L11