IL_4V5H_129

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

4V5H|1|BB|U|1523

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_129 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.1521

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

4V5H|1|BB|U|1468
4V5H|1|BB|A|1469
4V5H|1|BB|A|1470
4V5H|1|BB|G|1471
*
4V5H|1|BB|U|1520
4V5H|1|BB|G|1521
4V5H|1|BB|A|1522
4V5H|1|BB|U|1523
4V5H|1|BB|G|1524

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains