IL_4V5H_147

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_147 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1563

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

4V5H|1|BB|U|1851
4V5H|1|BB|U|1852
4V5H|1|BB|A|1853
4V5H|1|BB|A|1854
4V5H|1|BB|U|1855
4V5H|1|BB|U|1856
4V5H|1|BB|G|1857
4V5H|1|BB|A|1858
4V5H|1|BB|U|1859
4V5H|1|BB|G|1860
*
4V5H|1|BB|U|1882
4V5H|1|BB|U|1883
4V5H|1|BB|G|1884
4V5H|1|BB|A|1885
4V5H|1|BB|U|1886
4V5H|1|BB|C|1887
4V5H|1|BB|G|1888
4V5H|1|BB|A|1889
4V5H|1|BB|A|1890
4V5H|1|BB|G|1891

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains