IL_4V5M_045
3D structure
- PDB id
- 4V5M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.8 Å
Loop
- Sequence
- GUUG*CACUC
- Length
- 9 nucleotides
- Bulged bases
- 4V5M|1|AA|U|1126
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5M_045 not in the Motif Atlas
- Homologous match to IL_6CZR_158
- Geometric discrepancy: 0.2704
- The information below is about IL_6CZR_158
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- Minor groove platform
- Motif group
- IL_40144.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
4V5M|1|AA|G|1124
4V5M|1|AA|U|1125
4V5M|1|AA|U|1126
4V5M|1|AA|G|1127
*
4V5M|1|AA|C|1145
4V5M|1|AA|A|1146
4V5M|1|AA|C|1147
4V5M|1|AA|U|1148
4V5M|1|AA|C|1149
Current chains
- Chain AA
- 16S RRNA
Nearby chains
- Chain AI
- 30S RIBOSOMAL PROTEIN S9
- Chain AJ
- 30S RIBOSOMAL PROTEIN S10
Coloring options: