IL_4V5M_069
3D structure
- PDB id
- 4V5M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.8 Å
Loop
- Sequence
- CAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 4V5M|1|BA|G|352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5M_069 not in the Motif Atlas
- Homologous match to IL_7RQB_012
- Geometric discrepancy: 0.1706
- The information below is about IL_7RQB_012
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.7
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4V5M|1|BA|C|288
4V5M|1|BA|A|289
4V5M|1|BA|G|290
*
4V5M|1|BA|U|350
4V5M|1|BA|G|351
4V5M|1|BA|G|352
4V5M|1|BA|G|353
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: