IL_4V5M_126
3D structure
- PDB id
- 4V5M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.8 Å
Loop
- Sequence
- UCAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5M_126 not in the Motif Atlas
- Homologous match to IL_7RQB_074
- Geometric discrepancy: 0.235
- The information below is about IL_7RQB_074
- Detailed Annotation
- UAA/GAN with extra pair
- Broad Annotation
- No text annotation
- Motif group
- IL_90318.1
- Basepair signature
- cWW-tSH-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V5M|1|BA|U|1851
4V5M|1|BA|C|1852
4V5M|1|BA|A|1853
4V5M|1|BA|A|1854
4V5M|1|BA|G|1855
*
4V5M|1|BA|C|1887
4V5M|1|BA|G|1888
4V5M|1|BA|A|1889
4V5M|1|BA|A|1890
4V5M|1|BA|G|1891
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain AV
- Transfer RNA; tRNA
- Chain BD
- 50S RIBOSOMAL PROTEIN L2
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