IL_4V5O_010
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 4V5O|1|AA|U|164
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5O_010 not in the Motif Atlas
- Homologous match to IL_4V88_394
- Geometric discrepancy: 0.1891
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V5O|1|AA|G|137
4V5O|1|AA|G|138
4V5O|1|AA|A|139
4V5O|1|AA|U|140
4V5O|1|AA|A|141
4V5O|1|AA|A|142
4V5O|1|AA|C|143
*
4V5O|1|AA|G|159
4V5O|1|AA|C|160
4V5O|1|AA|U|161
4V5O|1|AA|A|162
4V5O|1|AA|A|163
4V5O|1|AA|U|164
4V5O|1|AA|A|165
4V5O|1|AA|C|166
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain AP
- RPS24E
- Chain AY
- RPS6E
Coloring options: