IL_4V5O_046
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- GGAU*GCAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5O_046 not in the Motif Atlas
- Homologous match to IL_4V88_438
- Geometric discrepancy: 0.1484
- The information below is about IL_4V88_438
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
4V5O|1|AA|G|1019
4V5O|1|AA|G|1020
4V5O|1|AA|A|1021
4V5O|1|AA|U|1022
*
4V5O|1|AA|G|1046
4V5O|1|AA|C|1047
4V5O|1|AA|A|1048
4V5O|1|AA|C|1049
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain A4
- 40S RIBOSOMAL PROTEIN S3A
- Chain A5
- RIBOSOMAL PROTEIN S26E CONTAINING PROTEIN
- Chain AB
- RPS0E
- Chain AO
- RPS13E
Coloring options: