IL_4V5O_069
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- CUA*UGGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5O_069 not in the Motif Atlas
- Homologous match to IL_8C3A_465
- Geometric discrepancy: 0.2051
- The information below is about IL_8C3A_465
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76236.1
- Basepair signature
- cWW-tWH-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4V5O|1|AA|C|1359
4V5O|1|AA|U|1360
4V5O|1|AA|A|1361
*
4V5O|1|AA|U|1378
4V5O|1|AA|G|1379
4V5O|1|AA|G|1380
4V5O|1|AA|A|1381
4V5O|1|AA|A|1382
4V5O|1|AA|G|1383
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain AG
- RIBOSOMAL PROTEIN S7 CONTAINING PROTEIN
- Chain AI
- RPS16E, 40S RIBOSOMAL PROTEIN RPS16E
- Chain AR
- RACK1
- Chain AV
- RPS17E
Coloring options: