IL_4V5O_093

3D structure

PDB id

4V5O (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

4V5O|1|BA|U|164

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66414.2

Basepair signature

cWW-cWW-tSH-tHS-tHS-L-R-cWW

Number of instances in this motif group

8

Unit IDs

4V5O|1|BA|G|137
4V5O|1|BA|G|138
4V5O|1|BA|A|139
4V5O|1|BA|U|140
4V5O|1|BA|A|141
4V5O|1|BA|A|142
4V5O|1|BA|C|143
*
4V5O|1|BA|G|159
4V5O|1|BA|C|160
4V5O|1|BA|U|161
4V5O|1|BA|A|162
4V5O|1|BA|A|163
4V5O|1|BA|U|164
4V5O|1|BA|A|165
4V5O|1|BA|C|166

Current chains

Chain BA

18S RRNA

Nearby chains

Chain BP

RPS24E

Chain BY

RPS6E