IL_4V5O_109

3D structure

PDB id

4V5O (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

4V5O|1|BA|U|551

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83039.1

Basepair signature

cWW-cWW

Number of instances in this motif group

89

Unit IDs

4V5O|1|BA|G|550
4V5O|1|BA|U|551
4V5O|1|BA|C|552
*
4V5O|1|BA|G|580
4V5O|1|BA|C|581

Current chains

Chain BA

18S RRNA

Nearby chains

Chain BC

KH DOMAIN CONTAINING PROTEIN

Chain BL

40S RIBOSOMAL PROTEIN S12

Chain BX

RPS30E