IL_4V5O_155

3D structure

PDB id

4V5O (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GGGAUA*UUGAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48233.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

4V5O|1|BA|G|1512
4V5O|1|BA|G|1513
4V5O|1|BA|G|1514
4V5O|1|BA|A|1515
4V5O|1|BA|U|1516
4V5O|1|BA|A|1517
*
4V5O|1|BA|U|1538
4V5O|1|BA|U|1539
4V5O|1|BA|G|1540
4V5O|1|BA|A|1541
4V5O|1|BA|A|1542
4V5O|1|BA|C|1543

Current chains

Chain BA

18S RRNA

Nearby chains

Chain AF

EIF1

Chain B8

RPS25E

Chain BM

RPS18E

Chain BT

RPS19E