IL_4V5Q_237
3D structure
- PDB id
- 4V5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCC*GGUAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5Q_237 not in the Motif Atlas
- Geometric match to IL_1GID_008
- Geometric discrepancy: 0.2914
- The information below is about IL_1GID_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
4V5Q|1|DA|G|272|||D
4V5Q|1|DA|G|272|||E
4V5Q|1|DA|C|272|||F
4V5Q|1|DA|C|272|||G
*
4V5Q|1|DA|G|363|||C
4V5Q|1|DA|G|363|||D
4V5Q|1|DA|U|363|||E
4V5Q|1|DA|A|363|||F
4V5Q|1|DA|C|364
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: