IL_4V61_028
3D structure
- PDB id
- 4V61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.4 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V61_028 not in the Motif Atlas
- Homologous match to IL_4LFB_032
- Geometric discrepancy: 0.0786
- The information below is about IL_4LFB_032
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.3
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
4V61|1|AA|G|722
4V61|1|AA|G|723
4V61|1|AA|G|724
4V61|1|AA|A|725
4V61|1|AA|G|726
*
4V61|1|AA|U|752
4V61|1|AA|C|753
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AK
- Ribosomal Protein S11
- Chain AU
- Ribosomal Protein S21
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BE
- Ribosomal Protein L2
Coloring options: