IL_4V65_035
3D structure
- PDB id
- 4V65 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome in the Pre-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- GCAC*GUUCCC
- Length
- 10 nucleotides
- Bulged bases
- 4V65|1|A1|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V65_035 not in the Motif Atlas
- Homologous match to IL_6CZR_149
- Geometric discrepancy: 0.5884
- The information below is about IL_6CZR_149
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93211.1
- Basepair signature
- cWW-cWS-cWW-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
4V65|1|A1|G|933
4V65|1|A1|C|934
4V65|1|A1|A|935
4V65|1|A1|C|936
*
4V65|1|A1|G|1379
4V65|1|A1|U|1380
4V65|1|A1|U|1381
4V65|1|A1|C|1382
4V65|1|A1|C|1383
4V65|1|A1|C|1384
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain AE
- Transfer RNA; tRNA
- Chain AM
- mRNA model
- Chain AP
- Transfer RNA; tRNA
- Chain AU
- 30S ribosomal protein S7
- Chain AW
- 30S ribosomal protein S9
Coloring options: