IL_4V66_010

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V66_010 not in the Motif Atlas

Homologous match to IL_5J7L_015

Geometric discrepancy: 0.4199

The information below is about IL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

4V66|1|A1|U|249
4V66|1|A1|A|250
4V66|1|A1|G|251
4V66|1|A1|U|252
*
4V66|1|A1|A|274
4V66|1|A1|G|275

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AJ

30S ribosomal protein S17