IL_4V66_040
3D structure
- PDB id
- 4V66 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- GUUGCC*GGAACUC
- Length
- 13 nucleotides
- Bulged bases
- 4V66|1|A1|U|1126
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V66_040 not in the Motif Atlas
- Homologous match to IL_4LFB_048
- Geometric discrepancy: 0.4738
- The information below is about IL_4LFB_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85222.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 1
Unit IDs
4V66|1|A1|G|1124
4V66|1|A1|U|1125
4V66|1|A1|U|1126
4V66|1|A1|G|1127
4V66|1|A1|C|1128
4V66|1|A1|C|1129
*
4V66|1|A1|G|1143
4V66|1|A1|G|1144
4V66|1|A1|A|1145
4V66|1|A1|A|1146
4V66|1|A1|C|1147
4V66|1|A1|U|1148
4V66|1|A1|C|1149
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain AW
- 30S ribosomal protein S9
- Chain AX
- 30S ribosomal protein S10
Coloring options: