IL_4V66_183
3D structure
- PDB id
- 4V66 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- GGGGUAG*CGAAUAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V66_183 not in the Motif Atlas
- Homologous match to IL_4WF9_031
- Geometric discrepancy: 0.5089
- The information below is about IL_4WF9_031
- Detailed Annotation
- 7x7 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_94128.1
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V66|1|BB|G|856
4V66|1|BB|G|857
4V66|1|BB|G|858
4V66|1|BB|G|859
4V66|1|BB|U|860
4V66|1|BB|A|861
4V66|1|BB|G|862
*
4V66|1|BB|C|915
4V66|1|BB|G|916
4V66|1|BB|A|917
4V66|1|BB|A|918
4V66|1|BB|U|919
4V66|1|BB|A|920
4V66|1|BB|C|921
Current chains
- Chain BB
- 23S rRNA
Nearby chains
- Chain BA
- 5S ribosomal RNA; 5S rRNA
- Chain BF
- 50S ribosomal protein L16
- Chain BP
- 50S ribosomal protein L27
- Chain BR
- 50S ribosomal protein L30
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