IL_4V68_075
3D structure
- PDB id
- 4V68 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.4 Å
Loop
- Sequence
- UUAAG*CGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V68_075 not in the Motif Atlas
- Homologous match to IL_4WF9_019
- Geometric discrepancy: 0.108
- The information below is about IL_4WF9_019
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.3
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V68|1|BA|U|606
4V68|1|BA|U|607
4V68|1|BA|A|608
4V68|1|BA|A|609
4V68|1|BA|G|610
*
4V68|1|BA|C|618
4V68|1|BA|G|619
4V68|1|BA|G|620
4V68|1|BA|A|621
4V68|1|BA|G|622
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BF
- 50S ribosomal protein L4
- Chain BP
- 50S ribosomal protein L15
Coloring options: