IL_4V69_012

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

4V69|1|AA|U|173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V69_012 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1371

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

4V69|1|AA|G|147
4V69|1|AA|G|148
4V69|1|AA|A|149
4V69|1|AA|U|150
4V69|1|AA|A|151
4V69|1|AA|A|152
4V69|1|AA|C|153
*
4V69|1|AA|G|168
4V69|1|AA|C|169
4V69|1|AA|U|170
4V69|1|AA|A|171
4V69|1|AA|A|172
4V69|1|AA|U|173
4V69|1|AA|A|174
4V69|1|AA|C|175

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AT

30S ribosomal protein S20