IL_4V69_154

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V69_154 not in the Motif Atlas

Geometric match to IL_3LA5_001

Geometric discrepancy: 0.1874

The information below is about IL_3LA5_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4V69|1|BB|C|2103
4V69|1|BB|C|2104
4V69|1|BB|U|2105
*
4V69|1|BB|A|2184
4V69|1|BB|U|2185
4V69|1|BB|G|2186

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain B5

50S ribosomal protein L1