IL_4V6A_037
3D structure
- PDB id
- 4V6A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of EF-P bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGG*CACAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6A_037 not in the Motif Atlas
- Geometric match to IL_5EW4_002
- Geometric discrepancy: 0.3705
- The information below is about IL_5EW4_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 29
Unit IDs
4V6A|1|AA|G|951
4V6A|1|AA|U|952
4V6A|1|AA|G|953
4V6A|1|AA|G|954
*
4V6A|1|AA|C|1226
4V6A|1|AA|A|1227
4V6A|1|AA|C|1228
4V6A|1|AA|A|1229
4V6A|1|AA|C|1230
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AI
- 30S ribosomal protein S9
- Chain AM
- 30S ribosomal protein S13
- Chain AS
- 30S ribosomal protein S19
- Chain AW
- Transfer RNA; tRNA
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