IL_4V6F_189

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

ACCC*GUU

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6F_189 not in the Motif Atlas

Geometric match to IL_8E0F_001

Geometric discrepancy: 0.3987

The information below is about IL_8E0F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09990.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

4V6F|1|CA|A|185
4V6F|1|CA|C|186
4V6F|1|CA|C|186|||A
4V6F|1|CA|C|186|||B
*
4V6F|1|CA|G|191|||E
4V6F|1|CA|U|191|||F
4V6F|1|CA|U|192

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CW

30S ribosomal protein S20