IL_4V6K_090
3D structure
- PDB id
- 4V6K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.25 Å
Loop
- Sequence
- C(PSU)GA*UGG
- Length
- 7 nucleotides
- Bulged bases
- 4V6K|1|AB|G|2458
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6K_090 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.2685
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
4V6K|1|AB|C|2456
4V6K|1|AB|PSU|2457
4V6K|1|AB|G|2458
4V6K|1|AB|A|2459
*
4V6K|1|AB|U|2493
4V6K|1|AB|G|2494
4V6K|1|AB|G|2495
Current chains
- Chain AB
- ribosomal RNA 23S
Nearby chains
- Chain AN
- 50S ribosomal protein L16
Coloring options: