IL_4V6L_026

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

UAAG*CUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6L_026 not in the Motif Atlas

Geometric match to IL_8C3A_429

Geometric discrepancy: 0.2782

The information below is about IL_8C3A_429

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_18471.2

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

4

Unit IDs

4V6L|1|AA|U|594
4V6L|1|AA|A|595
4V6L|1|AA|A|596
4V6L|1|AA|G|597
*
4V6L|1|AA|C|643
4V6L|1|AA|U|644
4V6L|1|AA|G|645

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein S8

Chain AU

30S ribosomal protein S17