#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 71-72-32-63-63-74-5
1 IL_3OXE_0023OXE0.69381Adomain II of glycine riboswitchC31G32A34G35*C70A71G72cWWtHScWW
2 IL_4V9F_0034V9F0.00000Major groove platform with extra cWW0 LSU rRNAC440A441A442C443*G39C40G41cWWcSHcWWancWWcWW
3 IL_3PDR_0043PDR0.29000Major groove platform with extra cWWXM-box riboswitch (ykoK leader)C33U34C35C36*G149U150G151cWWcSHcwWcWW
4 IL_8C3A_4298C3A0.43640CM SSU rRNAC656C657A658U659*A667U668G669cWWncSHncWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGAAG*CAG1
CAAC*GCG1
CUCC*GUG1
CCAU*AUG1
Non-Watson-Crick part of the motif
SequenceCounts
GAA*A1
AA*C1
UC*U1
CA*U1

Release history

Release3.803.813.823.833.843.853.863.873.883.893.90
Date2024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-06
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Major groove platform with extra cWW (2)
  • Basepair signature
    cWW-cSH-cWW-cWW
    Heat map statistics
    Min 0.29 | Avg 0.44 | Max 0.84
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