IL_4V6M_127
3D structure
- PDB id
- 4V6M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-SecYE complex in the membrane environment
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.1 Å
Loop
- Sequence
- CUAU*AAAUG
- Length
- 9 nucleotides
- Bulged bases
- 4V6M|1|B8|U|1554
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6M_127 not in the Motif Atlas
- Homologous match to IL_7A0S_053
- Geometric discrepancy: 0.4077
- The information below is about IL_7A0S_053
- Detailed Annotation
- tSH-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_99646.2
- Basepair signature
- cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V6M|1|B8|C|1437
4V6M|1|B8|U|1438
4V6M|1|B8|A|1439
4V6M|1|B8|U|1440
*
4V6M|1|B8|A|1551
4V6M|1|B8|A|1552
4V6M|1|B8|A|1553
4V6M|1|B8|U|1554
4V6M|1|B8|G|1555
Current chains
- Chain B8
- 23S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: