IL_4V6M_173
3D structure
- PDB id
- 4V6M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-SecYE complex in the membrane environment
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.1 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6M_173 not in the Motif Atlas
- Homologous match to IL_7RQB_103
- Geometric discrepancy: 0.1214
- The information below is about IL_7RQB_103
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.1
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V6M|1|B8|C|2652
4V6M|1|B8|U|2653
4V6M|1|B8|A|2654
4V6M|1|B8|G|2655
4V6M|1|B8|U|2656
4V6M|1|B8|A|2657
4V6M|1|B8|C|2658
*
4V6M|1|B8|G|2663
4V6M|1|B8|G|2664
4V6M|1|B8|A|2665
4V6M|1|B8|C|2666
4V6M|1|B8|C|2667
4V6M|1|B8|G|2668
Current chains
- Chain B8
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BG
- 50S ribosomal protein L6
- Chain BK
- 50S ribosomal protein L14
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