IL_4V6N_181
3D structure
- PDB id
- 4V6N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- UGG*UUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6N_181 not in the Motif Atlas
- Geometric match to IL_4V88_406
- Geometric discrepancy: 0.2987
- The information below is about IL_4V88_406
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_76004.2
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 18
Unit IDs
4V6N|1|AB|U|694
4V6N|1|AB|G|695
4V6N|1|AB|G|696
*
4V6N|1|AB|U|766
4V6N|1|AB|U|767
4V6N|1|AB|G|768
Current chains
- Chain AB
- 23S ribosomal RNA
Nearby chains
- Chain A5
- 50S ribosomal protein L34
- Chain AD
- 50S ribosomal protein L2
Coloring options: