IL_4V6P_049
3D structure
- PDB id
- 4V6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.5 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6P_049 not in the Motif Atlas
- Geometric match to IL_4V88_448
- Geometric discrepancy: 0.3601
- The information below is about IL_4V88_448
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30342.2
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
4V6P|1|AA|G|1061
4V6P|1|AA|U|1062
4V6P|1|AA|C|1063
*
4V6P|1|AA|G|1193
4V6P|1|AA|U|1194
4V6P|1|AA|C|1195
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AC
- mRNA
- Chain AF
- 30S ribosomal protein S3
- Chain AH
- 30S ribosomal protein S5
- Chain AL
- 30S ribosomal protein S9
- Chain AM
- 30S ribosomal protein S10
- Chain AQ
- 30S ribosomal protein S14
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