IL_4V6P_165
3D structure
- PDB id
- 4V6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.5 Å
Loop
- Sequence
- UGUUC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 4V6P|1|BB|U|2689, 4V6P|1|BB|U|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6P_165 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.2235
- The information below is about IL_4WF9_102
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
4V6P|1|BB|U|2687
4V6P|1|BB|G|2688
4V6P|1|BB|U|2689
4V6P|1|BB|U|2690
4V6P|1|BB|C|2691
*
4V6P|1|BB|G|2718
4V6P|1|BB|G|2719
4V6P|1|BB|U|2720
4V6P|1|BB|A|2721
4V6P|1|BB|G|2722
Current chains
- Chain BB
- 23S ribomosomal RNA
Nearby chains
- Chain BE
- 50S ribosomal protein L3
- Chain BM
- 50S ribosomal protein L14
- Chain BP
- 50S ribosomal protein L17
- Chain BR
- 50S ribosomal protein L19
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